Recent Publications
Molecular mechanism underlying mechanical wounding-induced flavonoid accumulation in dalbergia odorifera T. Chen, an endangered tree that produces Chinese Rosewood
Sun, Y., Gao, M., Kang, S., Yang, C., Meng, H., Yang, Y., Zhao, X., Gao, Z., Xu, Y., Jin, Y., Zhao, X., Zhang, Z. & Han, J., May 2020, In : Genes. 11, 5, 478.Research output: Contribution to journal › Article
Thrips as the transmission bottleneck for mixed infection of two orthotospoviruses
Zhao, K. & Rosa, C., Apr 2020, In : Plants. 9, 4, 509.Research output: Contribution to journal › Article
Distribution of recently identified bee-infecting viruses in managed honey bee (Apis mellifera) populations in the USA
Ray, A. M., Lopez, D. L., Iturralde Martinez, J. F., Galbraith, D. A., Rose, R., VAN Engelsdorp, D., Rosa, C., Evans, J. D. & Grozinger, C. M., Jan 1 2020, (Accepted/In press) In : Apidologie.Research output: Contribution to journal › Article
The emergence of microbiome centres
Martiny, J. B. H., Whiteson, K. L., Bohannan, B. J. M., David, L. A., Hynson, N. A., McFall-Ngai, M., Rawls, J. F., Schmidt, T. M., Abdo, Z., Blaser, M. J., Bordenstein, S., Bréchot, C., Bull, C. T., Dorrestein, P., Eisen, J. A., Garcia-Pichel, F., Gilbert, J., Hofmockel, K. S., Holtz, M. L., Knight, R. & 8 others, , Jan 1 2020, In : Nature Microbiology. 5, 1, p. 2-3 2 p.Research output: Contribution to journal › Comment/debate
Dissecting the economic impact of soybean diseases in the United States over two decades
Bandara, A. Y., Weerasooriya, D. K., Bradley, C. A., Allen, T. W. & Esker, P. D., Jan 1 2020, In : PloS one. 15, 4, e0231141.Research output: Contribution to journal › Article
Identification of Pseudomonas isolates associated with bacterial canker of stone fruit trees in the Western Cape, South Africa
Bophela, K. N., Petersen, Y., Carolee, T. B. & Teresa, A. C., Jan 1 2020, In : Plant disease. 104, 3, p. 882-892 11 p.Research output: Contribution to journal › Article
Virus evolution and ecology: Role of viruses in adaptation of life to extreme environments
Roossinck, M. J., Dec 7 2018, Handbook of Astrobiology. CRC Press, p. 677-680 4 p.Research output: Chapter in Book/Report/Conference proceeding › Chapter
Crop Rotation and Management Effect on Fusarium spp. Populations
Marburger, D. A., Venkateshwaran, M., Conley, S. P., Esker, P. D., Lauer, J. G. & Ané, J. M., Jan 1 2015, In : Crop Science. 55, 1, p. 365-376 12 p.Research output: Contribution to journal › Article
Endophytic Metarhizium robertsii promotes maize growth, suppresses insect growth, and alters plant defense gene expression
Ahmad, I., Jiménez-Gasco, M. D. M., Luthe, D. S., Shakeel, S. N. & Barbercheck, M. E., May 2020, In : Biological Control. 144, 104167.Research output: Contribution to journal › Article
Modeling yield losses and fungicide profitability for managing Fusarium head blight in Brazilian spring wheat
Duffeck, M. R., dos Santos Alves, K., Machado, F. J., Esker, P. D. & Del Ponte, E. M., Jan 1 2020, In : PHYTOPATHOLOGY. 110, 2, p. 370-378 9 p.Research output: Contribution to journal › Article
Innovative Technologies Can Improve Understanding of Microbial Nitrogen Dynamics in Agricultural Soils
Cloutier, M. L., Bhowmik, A., Bell, T. H. & Bruns, M. A., Jan 1 2019, In : Agricultural and Environmental Letters. 4, 1, p. 1-6 6 p.Research output: Contribution to journal › Comment/debate
Creeping bentgrass fairway wear resistance by granular topdressing of Ca/Mg-rich liming agents
Pruyne, D. T., Schlossberg, M. J. & Uddin, W., Feb 2020, In : Agriculture (Switzerland). 10, 2, 43.Research output: Contribution to journal › Article
Blistering1 modulates penicillium expansum virulence via vesicle-mediated protein secretion
Jurick, W. M., Peng, H., Beard, H. S., Garrett, W. M., Lichtner, F. J., Luciano-Rosario, D., Macarisin, O., Liu, Y., Peter, K. A., Gaskins, V. L., Yang, T., Mowery, J., Bauchan, G., Keller, N. P. & Cooper, B., Jan 1 2020, In : Molecular and Cellular Proteomics. 19, 2, p. 344-361 18 p.Research output: Contribution to journal › Article
Metatranscriptomic sequencing of a cyanobacterial soil-surface consortium with and without a diverse underlying soil microbiome
Bell, T. H., Trexler, R. V., Peng, X., Huntemann, M., Clum, A., Foster, B., Foster, B., Roux, S., Palaniappan, K., Varghese, N., Mukherjee, S., Reddy, T. B. K., Daum, C., Copeland, A., Ivanova, N. N., Kyrpides, N. C., Pennacchio, C., Eloe-Fadrosh, E. A. & Bruns, M. A., Jan 2 2020, In : Microbiology Resource Announcements. 9, 1, e01361-19.Research output: Contribution to journal › Article
First report of Fusarium equiseti causing wilt on lentils (Lens culinaris Medik.) in Pakistan
Rafique, K., Rauf, C. A. & Kang, S., Jan 1 2019, (Accepted/In press) In : Journal of Plant Pathology.Research output: Contribution to journal › Comment/debate
Staghorn Sumac (Rhus typhina): A New Bioindicator to Detect Phytotoxic Levels of Ambient Ozone in the Eastern United States
Seiler, L. K., Decoteau, D. R., Marini, R. P. & Davis, D. D., Dec 1 2019, In : Northeastern Naturalist. 26, 4, p. 807-816 10 p.Research output: Contribution to journal › Article
Secreted metabolite-mediated interactions between rhizosphere bacteria and Trichoderma biocontrol agents
Li, N., Islam, M. T. & Kang, S., Jan 1 2019, In : PloS one. 14, 12, e0227228.Research output: Contribution to journal › Article
Evolution of the Genes Encoding Effector Candidates Within Multiple Pathotypes of Magnaporthe oryzae
Kim, K. T., Ko, J., Song, H., Choi, G., Kim, H., Jeon, J., Cheong, K., Kang, S. & Lee, Y. H., Nov 6 2019, In : Frontiers in Microbiology. 10, 2575.Research output: Contribution to journal › Article
Physicochemical characterization of composts for the cultivation of Pleurotus ostreatus
Zanon, A. R., De Jesus, J. P. F., Vieira, F. R., Martins, O. G. & De Andrade, M. C. N., Jan 1 2019, In : Revista em Agronegocio e Meio Ambiente. 12, 3, p. 1167-1181 15 p.Research output: Contribution to journal › Article
Genetic analysis of resistance to bacterial leaf spot in the heirloom lettuce cultivar Reine des Glaces
Sandoya, G. V., Maisonneuve, B., Truco, M. J., Bull, C. T., Simko, I., Trent, M., Hayes, R. J. & Michelmore, R. W., Dec 1 2019, In : Molecular Breeding. 39, 12, 160.Research output: Contribution to journal › Article
Parasitic Wasp Mediates Plant Perception of Insect Herbivores
Tan, C. W., Peiffer, M., Hoover, K., Rosa, C. & Felton, G. W., Dec 1 2019, In : Journal of Chemical Ecology. 45, 11-12, p. 972-981 10 p.Research output: Contribution to journal › Article
Effects of straw, sawdust and sand bedding on dairy manure composting
Michel, F. C., Keener, H. M., Rigot, J., Wilkinson, T. & Pecchia, J., Dec 1 2004, p. 4669-4682. 14 p.Research output: Contribution to conference › Paper
100 years since Tolaas: Bacterial blotch of mushrooms in the 21st century
Osdaghi, E., Martins, S. J., Ramos-Sepulveda, L., Vieira, F. R., Pecchia, J. A., Beyer, D. M., Bell, T. H., Yang, Y., Hockett, K. L. & Bull, C. T., Jan 1 2019, In : Plant disease. 103, 11, p. 2714-2732 19 p.Research output: Contribution to journal › Review article
Vertical distribution of aphids (Homoptera: Aphididae) in the planetary boundary layer
Isard, S. A., Irwin, M. E. & Hollinger, S. E., Dec 1 1990, In : Environmental Entomology. 19, 6, p. 1473-1484 12 p.Research output: Contribution to journal › Article
Three novel Ambrosia Fusarium Clade species producing clavate macroconidia known (F. floridanum and F. obliquiseptatum) or predicted (F. tuaranense) to be farmed by Euwallacea spp. (Coleoptera: Scolytinae) on woody hosts
Aoki, T., Smith, J. A., Kasson, M. T., Freeman, S., Geiser, D. M., Geering, A. D. W. & O’Donnell, K., Nov 2 2019, In : Mycologia. 111, 6, p. 919-935 17 p.Research output: Contribution to journal › Article
Development of a mushroom harvesting assistance system using computer vision
Lee, C. H., Choi, D., Pecchia, J., He, L. & Heinemann, P., Jan 1 2019.Research output: Contribution to conference › Paper
Perennial ryegrass wear resistance and soil amendment by Ca- And Mg-silicates
Pruyne, D. T., Schlossberg, M. J. & Uddin, W., Sep 25 2019, In : Agronomy. 9, 10, 578.Research output: Contribution to journal › Article
Comparative analysis uncovers the limitations of current molecular detection methods for Fusarium oxysporum f. Sp. Cubense Race 4 strains
Magdama, F., Monserrate-Maggi, L., Serrano, L., Sosa, D., Geiser, D. M. & Jiménez-Gasco, M. D. M., Jan 1 2019, In : PloS one. 14, 9, e0222727.Research output: Contribution to journal › Article
Viruses in the phytobiome
Roossinck, M. J., Aug 2019, In : Current Opinion in Virology. 37, p. 72-76 5 p.Research output: Contribution to journal › Review article
Predicting CRISPR/Cas9-Induced Mutations for Precise Genome Editing
Molla, K. A. & Yang, Y., Feb 2020, In : Trends in Biotechnology. 38, 2, p. 136-141 6 p.Research output: Contribution to journal › Short survey
Neonicotinoid seed treatments of soybean provide negligible benefits to US farmers
Mourtzinis, S., Krupke, C. H., Esker, P. D., Varenhorst, A., Arneson, N. J., Bradley, C. A., Byrne, A. M., Chilvers, M. I., Giesler, L. J., Herbert, A., Kandel, Y. R., Kazula, M. J., Hunt, C., Lindsey, L. E., Malone, S., Mueller, D. S., Naeve, S., Nafziger, E., Reisig, D. D., Ross, W. J. & 3 others, , Dec 1 2019, In : Scientific reports. 9, 1, 11207.Research output: Contribution to journal › Article
Medicago sativa has reduced biomass and nodulation when grown with soil microbiomes conditioned to high phosphorus inputs
Kaminsky, L. M., Thompson, G. L., Trexler, R. V., Bell, T. H. & Kao-Kniffin, J., Jan 1 2018, In : Phytobiomes Journal. 2, 4, p. 237-248 12 p.Research output: Contribution to journal › Article
Root cortical anatomy is associated with differential pathogenic and symbiotic fungal colonization in maize
Galindo-Castañeda, T., Brown, K. M., Kuldau, G. A., Roth, G. W., Wenner, N. G., Ray, S., Schneider, H. & Lynch, J. P., Nov 1 2019, In : Plant Cell and Environment. 42, 11, p. 2999-3014 16 p.Research output: Contribution to journal › Article
Effects of isolates of Clarireedia jacksonii and Clarireedia monteithiana on severity of dollar spot in turfgrasses by host type
Aynardi, B. A., Jimenez Gasco, M. D. M. & Uddin, W., Nov 1 2019, In : European Journal of Plant Pathology. 155, 3, p. 817-829 13 p.Research output: Contribution to journal › Article
Erwinia amylovora auxotrophic mutant exometabolomics and virulence on apples
Klee, S. M., Sinn, J. P., Finley, M., Allman, E. L., Smith, P. B., Aimufua, O., Sitther, V., Lehman, B. L., Krawczyk, T., Peter, K. A. & McNellis, T. W., Jan 1 2019, In : Applied and environmental microbiology. 85, 15, e00935-19.Research output: Contribution to journal › Article
Mushroom sciarid fly, Lycoriella ingenua (Diptera: Sciaridae) adults and larvae vector Mushroom Green Mold (Trichoderma aggressivum ft. aggressivum) spores
Mazin, M., Harvey, R., Andreadis, S., Pecchia, J., Cloonan, K. & Rajotte, E. G., Nov 1 2019, In : Applied Entomology and Zoology. 54, 4, p. 369-376 8 p.Research output: Contribution to journal › Article
Optimizing fungicide timing for the management of white mold in processing snap bean in New York
Pethybridge, S. J., Gugino, B. K. & Kikkert, J. R., Nov 2019, In : Crop Protection. 125, 104883.Research output: Contribution to journal › Article
Corrigendum: Inference of convergent gene acquisition among pseudomonas syringae strains isolated from watermelon, cantaloupe, and squash (Frontiers in Microbiology (2019) 10 (270) DOI: 10.3389/fmicb.2019.00270)
Newberry, E. A., Ebrahim, M., Timilsina, S., Zlatković, N., Obradoví, A., Bull, C. T., Goss, E. M., Huguet-Tapia, J. C., Paret, M. L., Jones, J. B. & Potnis, N., Jan 1 2019, In : Frontiers in Microbiology. 10, MAY, 00963.Research output: Contribution to journal › Comment/debate
Efficacy of Double Nickel LC (Bacillus amyloliquefaciens D747 strain) for management of white mold in snap and dry bean
Pethybridge, S. J., Gugino, B. K. & Kikkert, J. R., Jan 1 2019, In : Plant Health Progress. 20, 1, p. 61-66 6 p.Research output: Contribution to journal › Article
Determinants of coinfection in the mycoviruses
Thapa, V. & Roossinck, M. J., Jan 1 2019, In : Frontiers in Cellular and Infection Microbiology. 9, MAY, 169.Research output: Contribution to journal › Comment/debate
Disruption and Overexpression of the Gene Encoding ACC (1-Aminocyclopropane-1-Carboxylic Acid) Deaminase in Soil-Borne Fungal Pathogen Verticillium dahliae Revealed the Role of ACC as a Potential Regulator of Virulence and Plant Defense
Tsolakidou, M. D., Pantelides, I., Tzima, A. K., Kang, S., Paplomatas, E. J. & Tsaltas, D., Jun 2019, In : Molecular Plant-Microbe Interactions. 32, 6, p. 639-653 15 p.Research output: Contribution to journal › Article
Impact of Ammonia During Composting on Calonectria pseudonaviculata and C. henricotiae, Causal Agents of Boxwood Blight
Harvey, R. J., Shishkoff, N., Pecchia, J. A. & Davis, D. D., Apr 3 2019, In : Compost Science and Utilization. 27, 2, p. 116-123 8 p.Research output: Contribution to journal › Article
Unraveling the ecology and epidemiology of an emerging fungal disease, sea turtle egg fusariosis (STEF)
Smyth, C. W., Sarmiento-Ramírez, J. M., Short, D. P. G., Diéguez-Uribeondoid, J., O’donnell, K. & Geiser, D. M., May 2019, In : PLoS pathogens. 15, 5, e1007682.Research output: Contribution to journal › Article
Host-specific symptoms and increased release of Xanthomonas citri and X.campestris pv. malvacearum from leaves are determined by the 102-bp tandem repeats of pthA and avrb6, respectively
Yang, Y., De Feyter, R. & Gabriel, D. W., Jan 1 1994, In : Molecular Plant-Microbe Interactions. 7, 3, p. 345-355 11 p.Research output: Contribution to journal › Article
Xanthomonas avirulence/pathogenicity gene family encodes functional plant nuclear targeting signals
Yang, Y. & Gabriel, D. W., Jul 1 1995, In : Molecular Plant-Microbe Interactions. 8, 4, p. 627-631 5 p.Research output: Contribution to journal › Article
The Bax inhibitor UvBI-1, a negative regulator of mycelial growth and conidiation, mediates stress response and is critical for pathogenicity of the rice false smut fungus Ustilaginoidea virens
Xie, S., Wang, Y., Wei, W., Li, C., Liu, Y., Qu, J., Meng, Q., Lin, Y., Yin, W., Yang, Y. & Luo, C., Oct 1 2019, In : Current Genetics. 65, 5, p. 1185-1197 13 p.Research output: Contribution to journal › Article
Extragenic suppression of elongation factor P gene mutant phenotypes in erwinia amylovora
Klee, S. M., Sinn, J. P., Holmes, A. C., Lehman, B. L., Krawczyk, T., Peter, K. A. & McNellis, T. W., Jan 1 2019, In : Journal of bacteriology. 201, 11, e0072218.Research output: Contribution to journal › Article
Inference of convergent gene acquisition among Pseudomonas syringae strains isolated from watermelon, cantaloupe, and squash
Newberry, E. A., Ebrahim, M., Timilsina, S., Zlatković, N., Obradović, A., Bull, C. T., Goss, E. M., Huguet-Tapia, J. C., Paret, M. L., Jones, J. B. & Potnis, N., Jan 1 2019, In : Frontiers in Microbiology. 10, FEB, 270.Research output: Contribution to journal › Article
The apple fruitlet model system for fire blight disease
Klee, S. M., Sinn, J. P. & McNellis, T. W., Jan 1 2019, Methods in Molecular Biology. Humana Press Inc., p. 187-198 12 p. (Methods in Molecular Biology; vol. 1991).Research output: Chapter in Book/Report/Conference proceeding › Chapter
Manipulation of aphid behavior by a persistent plant virus
Safari, M., Ferrari, M. J. & Roossinck, M. J., May 1 2019, In : Journal of virology. 93, 9, e01781-18.Research output: Contribution to journal › Article