Recent Publications
Baseline sensitivity of penicillium spp. To difenoconazole
Jurick, W. M., Macarisin, O., Gaskins, V. L., Janisiewicz, W. J., Peter, K. A. & Cox, K. D., Feb 1 2019, In : Plant disease. 103, 2, p. 331-337 7 p.Research output: Contribution to journal › Article
Molecular systematics of two sister clades, the Fusarium concolor and F. babinda species complexes, and the discovery of a novel microcycle macroconidium-producing species from South Africa
Jacobs-Venter, A., Laraba, I., Geiser, D. M., Busman, M., Vaughan, M. M., Proctor, R. H., McCormick, S. P. & O'Donnell, K., Nov 1 2018, In : Mycologia. 110, 6, p. 1189-1204 16 p.Research output: Contribution to journal › Article
Genome sequence of a lethal vascular wilt fungus, verticillium nonalfalfae, a biological control used against the invasive ailanthus altissima
Kasson, M. T., Kasson, L. R., Wickert, K. L., Davis, D. D. & Stajich, J. E., Jan 24 2019, In : Microbiology Resource Announcements. 8, 4, e01619-18.Research output: Contribution to journal › Article
Marasas et al. 1984 "Toxigenic Fusarium Species: Identity and Mycotoxicology" revisited
O'Donnell, K., McCormick, S. P., Busman, M., Proctor, R. H., Ward, T. J., Doehring, G., Geiser, D. M., Alberts, J. F. & Rheeder, J. P., Nov 1 2018, In : Mycologia. 110, 6, p. 1058-1080 23 p.Research output: Contribution to journal › Article
A multiplexed CRISPR/cas9 editing system based on the endogenous tRNA processing
Xie, K. & Yang, Y., Jan 1 2019, Methods in Molecular Biology. Humana Press Inc., p. 63-73 11 p. (Methods in Molecular Biology; vol. 1917).Research output: Chapter in Book/Report/Conference proceeding › Chapter
A 1,000-year-old RNA virus
Peyambari, M., Warner, S., Stoler, N., Rainer, D. & Roossinck, M. J., Jan 1 2019, In : Journal of virology. 93, 1, e01188-18.Research output: Contribution to journal › Article
Online aerobiology process model
Russo, J. M. & Isard, S. A., Jan 1 2011, GIS Applications in Agriculture: Volume Three: Invasive Species. CRC Press, p. 159-166 8 p.Research output: Chapter in Book/Report/Conference proceeding › Chapter
Survival of Lab Grown Calonectria pseudonaviculata Microsclerotia During Small-Scale Composting
Harvey, R. J., Davis, D. D., Shishkoff, N. & Pecchia, J. A., Jan 1 2019, (Accepted/In press) In : Compost Science and Utilization.Research output: Contribution to journal › Article
Whole-genome comparisons of Penicillium spp. Reveals secondary metabolic gene clusters and candidate genes associated with fungal aggressiveness during apple fruit decay
Wu, G., Jurick, W. M., Lichtner, F. J., Peng, H., Yin, G., Gaskins, V. L., Yin, Y., Hua, S. S., Peter, K. A. & Bennett, J. W., Jan 1 2019, In : PeerJ. 2019, 1, e6170.Research output: Contribution to journal › Article
Exploring oyster mushroom (Pleurotus ostreatus) substrate preparation by varying phase I composting time: changes in bacterial communities and physicochemical composition of biomass impacting mushroom yields
Vieira, F. R., Pecchia, J. A., Segato, F. & Polikarpov, I., Jan 1 2018, (Accepted/In press) In : Journal of Applied Microbiology.Research output: Contribution to journal › Article
The Inherent Conflicts in Developing Soil Microbial Inoculants
Kaminsky, L. M., Trexler, R. V., Malik, R. J., Hockett, K. & Bell, T., Feb 1 2019, In : Trends in Biotechnology. 37, 2, p. 140-151 12 p.Research output: Contribution to journal › Review article
Multiplexed Interactions. Viruses of Endophytic Fungi.
Bao, X. & Roossinck, M. J., Jan 1 2013, Advances in Virus Research. Academic Press Inc., p. 37-58 22 p. (Advances in Virus Research; vol. 86).Research output: Chapter in Book/Report/Conference proceeding › Chapter
CRISPR-PLANT v2: an online resource for highly specific guide RNA spacers based on improved off-target analysis
Minkenberg, B., Zhang, J., Xie, K. & Yang, Y., Jan 1 2018, (Accepted/In press) In : Plant Biotechnology Journal.Research output: Contribution to journal › Article
Localized recombination drives diversification of killing spectra for phage-derived syringacins
Baltrus, D. A., Clark, M., Smith, C. & Hockett, K., Jan 1 2018, (Accepted/In press) In : ISME Journal.Research output: Contribution to journal › Article
New records of rust disease caused by Uromyces halstedii in North America
Davis, D. D., Harvey, R. J. & Aime, M. C., Jan 1 2018, In : Plant disease. 102, 11, 1 p.Research output: Contribution to journal › Comment/debate
Soybean yield loss estimates due to diseases in the United States and Ontario, Canada, from 2010 to 2014
Allen, T. W., Bradley, C. A., Sisson, A. J., Byamukama, E., Chilvers, M. I., Coker, C. M., Collins, A. A., Damicone, J. P., Dorrance, A. E., Dufault, N. S., Esker, P., Faske, T. R., Giesler, L. J., Grybauskas, A. P., Hershman, D. E., Hollier, C. A., Isakeit, T., Jardine, D. J., Kelly, H. M., Kemerait, R. C. & 23 others, Jan 1 2017, In : Plant Health Progress. 18, 1, p. 19-27 9 p.Research output: Contribution to journal › Article
Evaluating the profitability of foliar fungicide programs in mid-atlantic soft-red winter wheat production
Sylvester, P. N., Lana, F. D., Mehl, H. L., Collins, A. A., Paul, P. A. & Kleczewski, N. M., Aug 1 2018, In : Plant disease. 102, 8, p. 1627-1637 11 p.Research output: Contribution to journal › Article
Corn yield loss estimates due to diseases in the United States and Ontario, Canada from 2012 to 2015
Mueller, D. S., Wise, K. A., Sisson, A. J., Allen, T. W., Bergstrom, G. C., Bosley, D. B., Bradley, C. A., Broders, K. D., Byamukama, E., Chilvers, M. I., Collins, A. A., Faske, T. R., Friskop, A. J., Heiniger, R. W., Hollier, C. A., Hooker, D. C., Isakeit, T., Jackson-Ziems, T. A., Jardine, D. J., Kelly, H. M. & 13 others, Jan 1 2016, In : Plant Health Progress. 17, 3, p. 211-222 12 p.Research output: Contribution to journal › Article
Meta-Analysis of the Effects of QoI and DMI Fungicide Combinations on Fusarium Head Blight and Deoxynivalenol in Wheat
Paul, P. A., Bradley, C. A., Madden, L. V., Lana, F. D., Bergstrom, G. C., Dill-Macky, R., Esker, P., Wise, K. A., McMullen, M., Grybauskas, A., Kirk, W. W., Milus, E. & Ruden, K., Dec 1 2018, In : Plant disease. 102, 12, p. 2602-2615 14 p.Research output: Contribution to journal › Article
Rethinking Invasion Impacts across Multiple Field Sites Using European Swallowwort (Vincetoxicum rossicum) as a Model Invader
Thompson, G. L., Bell, T. & Kao-Kniffin, J., Sep 1 2018, In : Invasive Plant Science and Management. 11, 3, p. 109-116 8 p.Research output: Contribution to journal › Article
Effects of Pre- and Postanthesis Applications of Demethylation Inhibitor Fungicides on Fusarium Head Blight and Deoxynivalenol in Spring and Winter Wheat
Paul, P. A., Bradley, C. A., Madden, L. V., Dalla Lana, F., Bergstrom, G. C., Dill-Macky, R., Wise, K. A., Esker, P., McMullen, M., Grybauskas, A., Kirk, W. W., Milus, E. & Ruden, K., Dec 1 2018, In : Plant disease. 102, 12, p. 2500-2510 11 p.Research output: Contribution to journal › Article
Defense signaling and pathway interactions involved in rice disease resistance
Zhou, X., Bailey, T. & Yang, Y., Jan 1 2006, Model Plants and Crop Improvement. CRC Press, p. 207-225 19 p.Research output: Chapter in Book/Report/Conference proceeding › Chapter
Environmental and Management Factors Associated with Bacterial Diseases of Onion in Pennsylvania
Pfeufer, E. E. & Gugino, B. K., Nov 1 2018, In : Plant disease. 102, 11, p. 2205-2211 7 p.Research output: Contribution to journal › Article
Large-scale synonymous substitutions in cucumber mosaic virus RNA 3 facilitate amino acid mutations in the coat protein
Mochizuki, T., Ohara, R. & Roossinck, M. J., Nov 1 2018, In : Journal of virology. 92, 22, e01007-18.Research output: Contribution to journal › Article
First report of fusarium stem canker on pyrularia pubera, a rare native parasitic shrub in forests of southwestern Pennsylvania
Wickert, K. L., Metheny, A. M., Davis, D. D., Geiser, D. M., Wenzel, J. W., Planinsek, D. & Kasson, M. T., Sep 1 2018, In : Plant Disease. 102, 9, 1 p.Research output: Contribution to journal › Comment/debate
Scout, snap, and share: First impressions of plant disease monitoring using social media
Mueller, D. S., Sisson, A. J., Kempker, R., Isard, S. A., Raymond, C., Gennett, A. J., Sheffer, W. & Bradley, C. A., Sep 1 2018, In : Plant Disease. 102, 9, p. 1681-1686 6 p.Research output: Contribution to journal › Article
Volatile compounds emitted by diverse verticillium species enhance plant growth by manipulating auxin signaling
Li, N., Wang, W., Bitas, V., Subbarao, K., Liu, X. & Kang, S., Oct 1 2018, In : Molecular Plant-Microbe Interactions. 31, 10, p. 1021-1031 11 p.Research output: Contribution to journal › Article
Fungicide resistance management guidelines for cucurbit downy and powdery mildew control in the mid-Atlantic and Northeast regions of the United States in 2018
Wyenandt, C. A., McGrath, M. T., Everts, K. L., Rideout, S. L., Gugino, B. K. & Kleczewski, N., Jan 1 2018, In : Plant Health Progress. 19, 1, p. 34-36 3 p.Research output: Contribution to journal › Article
Three Cycles of Recurrent Maternal Half-Sib Selection Continue to Reduce Foliar Late Blight in a Diploid Hybrid Solanum phureja-S. stenotomum Population
Haynes, K. G. & Qu, X., Feb 15 2019, In : American Journal of Potato Research. 96, 1Research output: Contribution to journal › Article
RNA interference mechanisms and applications in plant pathology
Rosa, C., Kuo, Y. W., Wuriyanghan, H. & Falk, B. W., Aug 25 2018, In : Annual Review of Phytopathology. 56, p. 581-610 30 p.Research output: Contribution to journal › Review article
Characterizing mycoviruses
Peyambari, M. & Roossinck, M. J., Jan 1 2018, Methods in Molecular Biology. Humana Press Inc., p. 13-24 12 p. (Methods in Molecular Biology; vol. 1848).Research output: Chapter in Book/Report/Conference proceeding › Chapter
Evolutionary and ecological links between plant and fungal viruses
Roossinck, M. J., Jan 1 2019, In : New Phytologist. 221, 1, p. 86-92 7 p.Research output: Contribution to journal › Review article
Perceptions of midwestern crop advisors and growers on foliar fungicide adoption and use in maize
Esker, P., Shah, D. A., Bradley, C. A., Conley, S. P., Paul, P. A. & Robertson, A. E., Sep 1 2018, In : PHYTOPATHOLOGY. 108, 9, p. 1078-1088 11 p.Research output: Contribution to journal › Article
Characterization of a new apple luteovirus identified by high-throughput sequencing
Liu, H., Wu, L., Nikolaeva, E., Peter, K. A., Liu, Z., Mollov, D., Cao, M. & Li, R., May 15 2018, In : Virology Journal. 15, 1, 85.Research output: Contribution to journal › Article
Genome-based evolutionary history of Pseudomonas spp
Hesse, C., Schulz, F., Bull, C. T., Shaffer, B. T., Yan, Q., Shapiro, N., Hassan, K. A., Varghese, N., Elbourne, L. D. H., Paulsen, I. T., Kyrpides, N., Woyke, T. & Loper, J. E., Jun 1 2018, In : Environmental microbiology. 20, 6, p. 2142-2159 18 p.Research output: Contribution to journal › Article
First report of ‘Candidatus phytoplasma trifolii’-related strain of 16SrVI-A phytoplasma subgroup, associated with elm yellows disease in american elm (Ulmus americana L.) in Ohio, U.S.A
Flower, C. E., Hayes-Plazolles, N., Slavicek, J. M. & Rosa, C., Feb 1 2018, In : Plant disease. 102, 2, 1 p.Research output: Contribution to journal › Comment/debate
Vineyard under-vine floor management alters soil microbial composition, while the fruit microbiome shows no corresponding shifts
Chou, M. Y., Vanden Heuvel, J., Bell, T., Panke-Buisse, K. & Kao-Kniffin, J., Dec 1 2018, In : Scientific Reports. 8, 1, 11039.Research output: Contribution to journal › Article
Multi-year surveys reveal significant decline in western corn rootworm densities in Illinois soybean fields
Tinsley, N. A., Spencer, J. L., Estes, R. E., Estes, K. A., Kaluf, A. L., Isard, S. A., Levine, E. & Gray, M. E., Jun 13 2018, In : American Entomologist. 64, 2, p. 112-119 8 p.Research output: Contribution to journal › Article
Coevolution of a persistent plant virus and its pepper hosts
Safari, M. & Roossinck, M. J., Jul 1 2018, In : Molecular Plant-Microbe Interactions. 31, 7, p. 766-776 11 p.Research output: Contribution to journal › Article
The ipmPIPE: Overview, lessons, opportunities, and challenges
VanKirk, J. R., Isard, S. A., Cardwell, K. F. & Draper, M. A., Jun 1 2012, In : Journal of Integrated Pest Management. 3, 2Research output: Contribution to journal › Article
Investigating the viral ecology of global bee communities with high-throughput metagenomics
Galbraith, D. A., Fuller, Z. L., Ray, A. M., Brockmann, A., Frazier, M., Gikungu, M. W., Martinez, J. F. I., Kapheim, K. M., Kerby, J. T., Kocher, S. D., Losyev, O., Muli, E., Patch, H. M., Rosa, C., Sakamoto, J. M., Stanley, S., Vaudo, A. D. & Grozinger, C. M., Dec 1 2018, In : Scientific Reports. 8, 1, 8879.Research output: Contribution to journal › Article
Adaptation of the Western Corn Rootworm to crop rotation: Evolution of a new strain in response to a management practice
Levine, E., Spencer, J. L., Isard, S. A., Onstad, D. W. & Gray, M. E., Jun 1 2002, In : American Entomologist. 48, 2, p. 94-107 14 p.Research output: Contribution to journal › Article
Canola root-Associated microbiomes in the Canadian Prairies
Lay, C. Y., Bell, T., Hamel, C., Harker, K. N., Mohr, R., Greer, C. W., Yergeau, É. & St-Arnaud, M., Jun 8 2018, In : Frontiers in Microbiology. 9, JUN, 1188.Research output: Contribution to journal › Article
Integrated pest Information Platform for Extension and Education (iPiPE): Progress through sharing
Isard, S. A., Russo, J. M., Magarey, R. D., Golod, J. & VanKirk, J. R., Mar 1 2015, In : Journal of Integrated Pest Management. 6, 1, 15.Research output: Contribution to journal › Article
A troubleshooting guide for mechanistic plant pest forecast models
Magarey, R. D. & Isard, S. A., Jan 1 2017, In : Journal of Integrated Pest Management. 8, 1, 1 p.Research output: Contribution to journal › Article
Biology, yield loss and control of sclerotinia stem rot of soybean
Peltier, A. J., Bradley, C. A., Chilvers, M. I., Malvick, D. K., Mueller, D. S., Wise, K. A. & Esker, P., Jun 1 2012, In : Journal of Integrated Pest Management. 3, 2Research output: Contribution to journal › Article
Sensitivity of Eleven Milkweed (Asclepias) Species to Ozone
Myers, A. C., Decoteau, D. R., Marini, R. P. & Davis, D. D., May 1 2018, In : Northeastern Naturalist. 25, 2, p. 265-276 12 p.Research output: Contribution to journal › Article
The rice blast resistance gene Ptr encodes an atypical protein required for broad-spectrum disease resistance
Zhao, H., Wang, X., Jia, Y., Minkenberg, B., Wheatley, M., Fan, J., Jia, M. H., Famoso, A., Edwards, J. D., Wamishe, Y., Valent, B., Wang, G. L. & Yang, Y., Dec 1 2018, In : Nature communications. 9, 1, 4369.Research output: Contribution to journal › Article
Population genetics of verticillium dahliae in Iran based on microsatellite and single nucleotide polymorphism markers
Rafiei, V., Banihashemi, Z., Bautista-Jalon, L. S., Jimenez Gasco, M. D. M., Gillian Turgeon, B. & Milgroom, M. G., Jun 1 2018, In : Phytopathology. 108, 6, p. 780-788 9 p.Research output: Contribution to journal › Article
Characterization of the first complete genome sequence of an Impatiens necrotic spot orthotospovirus isolate from the United States and worldwide phylogenetic analyses of INSV isolates
Zhao, K., Margaria, P. & Rosa, C., May 10 2018, In : BMC Research Notes. 11, 1, 288.Research output: Contribution to journal › Article